STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC90987.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
SDD57176.1
Hypothetical protein.
  
     0.767
SDC91170.1
Hypothetical protein.
  
     0.739
SDC53445.1
Hypothetical protein.
  
     0.691
SDD79140.1
Ribosomal protein S18 acetylase RimI.
  
     0.680
SDD79112.1
Hypothetical protein.
 
     0.669
SDC65153.1
Hypothetical protein.
  
     0.668
SDE01614.1
Hypothetical protein.
  
    0.667
SDE03127.1
Hypothetical protein.
  
     0.665
SDD51411.1
Nuclease-related domain-containing protein.
  
     0.664
SDC44096.1
Uncharacterized conserved protein YloU, alkaline shock protein (Asp23) family.
 
     0.654
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.