STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD19639.1Signal transduction histidine kinase. (572 aa)    
Predicted Functional Partners:
SDD19658.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 
 0.956
SDC32534.1
Two-component system, NarL family, response regulator DesR.
 
 
 0.806
SDC97582.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 
 0.782
SDC91363.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 
 0.770
SDC98206.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 
 0.769
SDD18130.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 
 0.761
SDC69626.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 
 0.756
SDC87498.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 
 0.756
SDC92113.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 
 0.756
SDC44605.1
Two-component system, NarL family, response regulator DesR.
 
 
 0.754
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.