STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD29511.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (251 aa)    
Predicted Functional Partners:
SDD27586.1
Hypothetical protein.
   
 0.579
SDD29554.1
Signal transduction histidine kinase.
  
 
 0.567
SDC53554.1
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.542
SDD39589.1
Acyl transferase domain-containing protein.
  
 
 0.541
SDC00815.1
Hypothetical protein.
   
 
 0.494
SDD00983.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 0.494
SDD39666.1
Arylsulfatase.
   
 
 0.494
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.482
SDC25815.1
Acyl transferase domain-containing protein.
  
 
 0.481
SDD29528.1
Response regulator receiver domain-containing protein.
       0.460
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.