STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD32296.1amphi-Trp domain-containing protein. (93 aa)    
Predicted Functional Partners:
SDD72398.1
Activator of Hsp90 ATPase homolog 1-like protein.
  
     0.641
SDD57834.1
Hypothetical protein.
  
     0.549
SDD70217.1
Hypothetical protein.
  
     0.516
SDC73197.1
PPE family protein.
  
     0.511
SDC49546.1
Hypothetical protein.
  
     0.503
SDD32310.1
GntR family transcriptional regulator / MocR family aminotransferase.
       0.486
SDC74043.1
Hypothetical protein.
  
     0.472
SDD34162.1
Hypothetical protein.
  
     0.436
SDD58443.1
Patatin-like phospholipase.
 
     0.431
SDC82350.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
     0.411
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.