STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD34878.1Drug/metabolite transporter, DME family. (303 aa)    
Predicted Functional Partners:
SDC11596.1
Threonine/homoserine efflux transporter RhtA.
 
     0.665
SDC42884.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.472
SDC83032.1
Helix-turn-helix domain-containing protein.
 
   
 0.472
SDD34833.1
Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.
  
  
 0.450
SDD34851.1
Uncharacterized conserved protein, DUF885 familyt.
       0.447
SDC66821.1
Hypothetical protein.
 
    0.431
SDC66041.1
Hypothetical protein.
 
     0.409
SDC56187.1
Threonine/homoserine efflux transporter RhtA.
  
     0.405
SDD67484.1
Uncharacterized conserved protein PhnB, glyoxalase superfamily.
  
     0.404
SDD34710.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
 
   
 0.402
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.