STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD39275.1Serine protease, subtilisin family. (437 aa)    
Predicted Functional Partners:
SDD39195.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
 
 0.753
SDC02818.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
     0.716
SDD39247.1
Hypothetical protein.
  
  
 0.701
SDC68172.1
Type VII secretion protein EccB.
 
 
 0.694
SDD39347.1
Type VII secretion protein EccB.
 
 
 0.694
SDC05313.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
  
     0.689
SDC76559.1
Type VII secretion protein EccB.
  
 
 0.679
SDC68129.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
 
 
 0.649
SDC68406.1
ATPase family associated with various cellular activities (AAA).
 
  
 0.642
SDD29396.1
Cation-transporting ATPase E.
   
 0.608
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.