STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD54078.1NitT/TauT family transport system ATP-binding protein. (276 aa)    
Predicted Functional Partners:
SDD54060.1
NitT/TauT family transport system permease protein.
  
 0.967
SDD06171.1
Sulfonate transport system permease protein.
 
  
 0.897
SDD60168.1
NitT/TauT family transport system permease protein.
  
 0.867
SDC44895.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 0.865
SDC44872.1
NitT/TauT family transport system permease protein.
 
  
 0.864
SDD04546.1
NitT/TauT family transport system permease protein.
 
  
 0.864
SDC27940.1
NitT/TauT family transport system permease protein.
  
 0.863
SDC89249.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 0.862
SDC29125.1
NitT/TauT family transport system permease protein.
  
 0.860
SDC23331.1
NitT/TauT family transport system permease protein.
  
 0.860
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.