STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD72151.1Osmoprotectant transport system permease protein. (246 aa)    
Predicted Functional Partners:
SDC64504.1
Osmoprotectant transport system substrate-binding protein.
 
 0.997
SDD72096.1
Osmoprotectant transport system ATP-binding protein.
 
 0.995
SDD72175.1
Osmoprotectant transport system substrate-binding protein.
 
 0.995
SDD52754.1
Osmoprotectant transport system substrate-binding protein.
 
 0.988
SDD52829.1
Osmoprotectant transport system ATP-binding protein.
 
 0.982
SDC64456.1
Osmoprotectant transport system ATP-binding protein.
 
 0.981
SDD72128.1
Osmoprotectant transport system permease protein.
 
  
0.927
SDD52813.1
Osmoprotectant transport system permease protein.
 
  
0.684
SDD72088.1
Predicted methyltransferase.
       0.567
SDD40575.1
Glycine betaine/proline transport system ATP-binding protein.
 
  
 0.483
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.