Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDC05178.1 | SDC53596.1 | SAMN05421630_101234 | SAMN05421630_102474 | L-lactate dehydrogenase (cytochrome). | L-lactate dehydrogenase (cytochrome). | 0.919 |
SDC05178.1 | SDD06251.1 | SAMN05421630_101234 | SAMN05421630_105398 | L-lactate dehydrogenase (cytochrome). | L-lactate dehydrogenase (cytochrome)/glycolate oxidase. | 0.917 |
SDC05178.1 | SDD77306.1 | SAMN05421630_101234 | SAMN05421630_11285 | L-lactate dehydrogenase (cytochrome). | Predicted arabinose efflux permease, MFS family. | 0.422 |
SDC53596.1 | SDC05178.1 | SAMN05421630_102474 | SAMN05421630_101234 | L-lactate dehydrogenase (cytochrome). | L-lactate dehydrogenase (cytochrome). | 0.919 |
SDC53596.1 | SDD06251.1 | SAMN05421630_102474 | SAMN05421630_105398 | L-lactate dehydrogenase (cytochrome). | L-lactate dehydrogenase (cytochrome)/glycolate oxidase. | 0.920 |
SDC53596.1 | SDD77306.1 | SAMN05421630_102474 | SAMN05421630_11285 | L-lactate dehydrogenase (cytochrome). | Predicted arabinose efflux permease, MFS family. | 0.422 |
SDD06251.1 | SDC05178.1 | SAMN05421630_105398 | SAMN05421630_101234 | L-lactate dehydrogenase (cytochrome)/glycolate oxidase. | L-lactate dehydrogenase (cytochrome). | 0.917 |
SDD06251.1 | SDC53596.1 | SAMN05421630_105398 | SAMN05421630_102474 | L-lactate dehydrogenase (cytochrome)/glycolate oxidase. | L-lactate dehydrogenase (cytochrome). | 0.920 |
SDD06251.1 | SDD77306.1 | SAMN05421630_105398 | SAMN05421630_11285 | L-lactate dehydrogenase (cytochrome)/glycolate oxidase. | Predicted arabinose efflux permease, MFS family. | 0.422 |
SDD77253.1 | SDD77284.1 | SAMN05421630_11283 | SAMN05421630_11284 | Flavocytochrome c. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.688 |
SDD77253.1 | SDD77306.1 | SAMN05421630_11283 | SAMN05421630_11285 | Flavocytochrome c. | Predicted arabinose efflux permease, MFS family. | 0.684 |
SDD77253.1 | SDD77331.1 | SAMN05421630_11283 | SAMN05421630_11286 | Flavocytochrome c. | DNA-binding transcriptional regulator, IclR family. | 0.485 |
SDD77284.1 | SDD77253.1 | SAMN05421630_11284 | SAMN05421630_11283 | 3-oxoacyl-[acyl-carrier protein] reductase. | Flavocytochrome c. | 0.688 |
SDD77284.1 | SDD77306.1 | SAMN05421630_11284 | SAMN05421630_11285 | 3-oxoacyl-[acyl-carrier protein] reductase. | Predicted arabinose efflux permease, MFS family. | 0.773 |
SDD77284.1 | SDD77331.1 | SAMN05421630_11284 | SAMN05421630_11286 | 3-oxoacyl-[acyl-carrier protein] reductase. | DNA-binding transcriptional regulator, IclR family. | 0.548 |
SDD77306.1 | SDC05178.1 | SAMN05421630_11285 | SAMN05421630_101234 | Predicted arabinose efflux permease, MFS family. | L-lactate dehydrogenase (cytochrome). | 0.422 |
SDD77306.1 | SDC53596.1 | SAMN05421630_11285 | SAMN05421630_102474 | Predicted arabinose efflux permease, MFS family. | L-lactate dehydrogenase (cytochrome). | 0.422 |
SDD77306.1 | SDD06251.1 | SAMN05421630_11285 | SAMN05421630_105398 | Predicted arabinose efflux permease, MFS family. | L-lactate dehydrogenase (cytochrome)/glycolate oxidase. | 0.422 |
SDD77306.1 | SDD77253.1 | SAMN05421630_11285 | SAMN05421630_11283 | Predicted arabinose efflux permease, MFS family. | Flavocytochrome c. | 0.684 |
SDD77306.1 | SDD77284.1 | SAMN05421630_11285 | SAMN05421630_11284 | Predicted arabinose efflux permease, MFS family. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.773 |
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