STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gvpAGas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (152 aa)    
Predicted Functional Partners:
SDD85557.1
Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.969
SDD85433.1
Gas vesicle protein.
 
   
 0.960
SDD85499.1
Polyketide cyclase / dehydrase and lipid transport.
 
     0.959
SDD85418.1
Gas vesicle protein K.
 
   
 0.958
SDD85456.1
Gas vesicle synthesis protein GvpL/GvpF.
 
   
 0.958
SDD85603.1
Gas vesicle synthesis protein GvpO.
 
   
 0.957
SDD85520.1
Hypothetical protein.
 
     0.952
SDD85478.1
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
0.881
SDD85540.1
Gas vesicle protein G.
     
 0.852
SDD85398.1
Histidine kinase.
       0.546
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.