STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD86239.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
SDD86215.1
Streptomycin 3-kinase; Belongs to the aminoglycoside phosphotransferase family.
 
     0.625
SDD86252.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.576
SDD86275.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.576
SDD86295.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
       0.576
SDD04719.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
  
    0.518
SDC32581.1
Hypothetical protein.
  
     0.517
SDC32648.1
Lysophospholipase, alpha-beta hydrolase superfamily.
  
     0.509
SDD39247.1
Hypothetical protein.
  
     0.496
SDC29463.1
Glucose / Sorbosone dehydrogenase.
  
     0.483
SDC21672.1
Pyridoxamine 5'-phosphate oxidase.
 
     0.474
Your Current Organism:
Prauserella marina
NCBI taxonomy Id: 530584
Other names: CCTCC AA 208056, DSM 45268, Prauserella marina Wang et al. 2010, Prauserella sp. Ms498, strain MS498
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.