STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER10687.1Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. (688 aa)    
Predicted Functional Partners:
SER10629.1
L-rhamnulokinase.
 
 
 0.951
SES04846.1
Rhamnulokinase.
 
 
 0.908
SER10189.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.813
SER68433.1
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.788
SER93534.1
Nicotinamidase-related amidase.
  
 0.768
SES08864.1
Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.766
rhaA
L-rhamnose isomerase; Belongs to the rhamnose isomerase family.
 
   
 0.752
xylB
Xylulokinase.
  
 
 0.749
SER47880.1
Gluconate kinase, FGGY family; Belongs to the FGGY kinase family.
  
 
 0.749
SER54845.1
Sugar (pentulose or hexulose) kinase.
  
 
 0.749
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.