STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER16120.1Stage III sporulation protein AE. (390 aa)    
Predicted Functional Partners:
SER16146.1
Stage III sporulation protein AD.
 
  
 0.990
SER16099.1
Stage III sporulation protein AF.
 
  
 0.988
SER16170.1
Stage III sporulation protein AC.
 
  
 0.986
SER16072.1
Stage III sporulation protein AG.
 
  
 0.976
SER16200.1
Stage III sporulation protein AB.
 
  
 0.973
SER16228.1
Stage III sporulation protein AA.
 
  
 0.964
SES10808.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
    0.933
SER16047.1
Stage III sporulation protein AH.
 
  
 0.894
SER15018.1
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
  
 0.818
SES28084.1
Stage II sporulation protein R.
  
    0.788
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.