STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER19082.1Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase. (410 aa)    
Predicted Functional Partners:
SER19055.1
Hypothetical protein.
 
 
 0.975
SER19115.1
Hypothetical protein.
  
 
  0.839
SER42256.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.797
SER42330.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.754
SER13106.1
Tetratricopeptide repeat-containing protein.
  
 
 0.744
SER42122.1
Tetratricopeptide repeat-containing protein.
  
 
 0.743
SES10016.1
Pullulanase, extracellular; Belongs to the glycosyl hydrolase 13 family.
    
 0.699
SER42855.1
Lysophospholipase L1.
    
  0.661
SER73466.1
TPR repeat-containing protein.
  
 
 0.639
SES08533.1
Tetratricopeptide repeat-containing protein.
  
 
 0.639
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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