STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER28456.1Alpha galactosidase A. (442 aa)    
Predicted Functional Partners:
SER28472.1
alpha-N-arabinofuranosidase.
 
   
 0.905
SER51013.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.798
SER51552.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.765
SER45500.1
alpha-L-fucosidase 2.
  
     0.719
SER42041.1
Hypothetical protein.
 
     0.711
SER44751.1
Concanavalin A-like lectin/glucanases superfamily protein.
 
   
 0.704
SER28437.1
alpha-N-arabinofuranosidase.
 
   
 0.697
SER49235.1
Beta-mannosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
  0.696
SER51814.1
Beta-galactosidase.
  
  
  0.686
SER90789.1
Hypothetical protein.
 
     0.651
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.