STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER35822.1Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. (471 aa)    
Predicted Functional Partners:
SER78263.1
Homoserine dehydrogenase.
    
  0.685
SER79386.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
   
 
 0.606
SER35759.1
Two-component system, NarL family, sensor histidine kinase DesK.
       0.515
SER35795.1
Two component transcriptional regulator, LuxR family.
       0.515
SER64312.1
MFS transporter, NNP family, nitrate/nitrite transporter.
     
 0.504
SER64375.1
MFS transporter, NNP family, nitrate/nitrite transporter.
     
 0.504
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.