STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER34263.1Two component transcriptional regulator, AraC family. (528 aa)    
Predicted Functional Partners:
SER34241.1
Two-component system, sensor histidine kinase YesM.
 
 
  0.946
SER06588.1
Flagellar motor switch protein FliN/FliY.
  
 0.797
SES16002.1
Serine/threonine protein kinase and signal transduction histidine kinase with GAF sensor.
   
 0.782
SER34288.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
       0.773
SER57664.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.750
SER15292.1
Two-component system, NtrC family, sensor histidine kinase AtoS.
 
 
 0.742
SER57060.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.733
SER06938.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.717
SER50668.1
Two-component system, sensor histidine kinase YesM.
 
 
  0.711
SER34214.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.706
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.