STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER50341.1Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (676 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
     0.865
SER25219.1
Endo-1,4-beta-xylanase, GH35 family.
 
   
 0.803
SER50430.1
Glycosyl hydrolases family 39.
 
     0.784
SES24847.1
Endo-1,4-beta-xylanase, GH35 family.
 
   
 0.755
SER44460.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.745
SER50309.1
Transcriptional regulator, GntR family.
       0.728
SER50403.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.723
SER50456.1
Glycosyl hydrolases family 39.
 
     0.708
SER50948.1
Putative GTP cyclohydrolase 1 type 2, NIF3 family.
 
     0.665
SER48937.1
Carbohydrate binding module (family 35); Belongs to the glycosyl hydrolase 26 family.
  
     0.621
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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