STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER50456.1Glycosyl hydrolases family 39. (139 aa)    
Predicted Functional Partners:
SER50430.1
Glycosyl hydrolases family 39.
     0.984
SER50918.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.759
SER50981.1
Uncharacterized membrane protein YesL.
 
     0.714
SER50341.1
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
     0.708
SER50948.1
Putative GTP cyclohydrolase 1 type 2, NIF3 family.
  
     0.651
SER42888.1
Hypothetical protein.
  
     0.645
SER28841.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
  
  
  0.600
SER49378.1
Multiple sugar transport system substrate-binding protein.
  
     0.596
SER51233.1
Uncharacterized membrane protein YesL.
 
     0.591
SER35471.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
  
     0.526
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.