STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER68625.1Rare lipoprotein A. (199 aa)    
Predicted Functional Partners:
SER29407.1
Oligogalacturonide lyase.
 
 
 0.608
SES26589.1
Intein N-terminal splicing region.
  
     0.582
SER68645.1
UDP-glucuronate 4-epimerase.
       0.551
SER48511.1
Hypothetical protein.
  
     0.531
SER35567.1
Uncharacterized membrane protein YesL.
  
     0.512
SER11930.1
Putative peptidoglycan binding domain-containing protein.
 
   
 0.500
SER57160.1
SLAP domain-containing protein.
  
     0.498
SER57822.1
Hypothetical protein.
  
     0.497
SER85398.1
Putative zincin peptidase.
  
     0.476
SES14685.1
Uncharacterized membrane protein YkvI.
  
     0.476
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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