STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES12409.1mRNA interferase MazF. (112 aa)    
Predicted Functional Partners:
SES12430.1
Antitoxin MazE.
 
 
 0.988
SER38165.1
CopG family transcriptional regulator / antitoxin EndoAI.
  
 
 0.859
SES12448.1
Putative membrane protein.
 
     0.689
SES12465.1
Hypothetical protein.
       0.615
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
       0.432
ureC
Urease subunit alpha.
       0.422
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
       0.422
Your Current Organism:
Gracilibacillus ureilyticus
NCBI taxonomy Id: 531814
Other names: CGMCC 1.7727, G. ureilyticus, Gracilibacillus sp. MF38, Gracilibacillus ureilyticus Huo et al. 2010, JCM 15711, strain MF38
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.