STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00047methionine-R-sulfoxide reductase. (181 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.993
FIC_00046
Possible conserved transmembrane protein.
       0.560
FIC_00403
Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase.
   
 
 0.548
rplT
LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.513
FIC_00092
Thioredoxin C-2; Belongs to the thioredoxin family.
   
 0.488
FIC_00290
Thioredoxin.
   
 0.488
FIC_00291
Thiol:disulfide interchange protein tlpA.
   
 0.488
FIC_00731
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
   
 0.488
FIC_00858
Hypothetical protein.
   
 0.488
FIC_00950
Thiol:disulfide interchange protein tlpA.
   
 0.488
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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