STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00093Hydrolase. (252 aa)    
Predicted Functional Partners:
FIC_00024
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.932
FIC_02175
Aspartate aminotransferase.
 
 0.928
FIC_01345
Aspartate aminotransferase.
 
 
 0.915
FIC_01433
Aminotransferase, class I.
  
 
 0.915
FIC_02360
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
    
 0.915
FIC_02092
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 0.831
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
    
 0.810
FIC_00780
2-oxoglutarate dehydrogenase E1 component.
   
 
  0.807
FIC_01991
Citrate synthase (si); Belongs to the citrate synthase family.
   
 
  0.802
FIC_00973
Isocitrate dehydrogenase (NADP); Belongs to the monomeric-type IDH family.
     
  0.800
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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