STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00095Membrane-associated zinc metalloprotease. (445 aa)    
Predicted Functional Partners:
FIC_00196
Outer membrane protein assembly factor YaeT precursor.
 
  
 0.801
FIC_00195
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.706
FIC_01279
Hypothetical protein.
 
  
 0.663
FIC_02065
Surface antigen (D15).
 
  
 0.629
FIC_00754
Signal peptidase I; Belongs to the peptidase S26 family.
 
  
 0.606
FIC_02240
Serine protease, HtrA/DegQ/DegS family.
 
  
 0.600
FIC_02471
Cell division protein ftsI (Peptidoglycan synthetase).
 
  
 0.595
FIC_02435
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
    0.591
FIC_02578
Putative patatin-like phospholipase.
  
  
 0.582
FIC_01456
Hypothetical protein.
  
  
 0.559
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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