STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00102Penicillin-binding protein 2 (PBP-2). (672 aa)    
Predicted Functional Partners:
FIC_00103
Rod shape-determining protein rodA; Belongs to the SEDS family.
 
 0.982
FIC_00099
Rod shape-determining protein mreB.
 
 0.959
FIC_00100
Rod shape-determining protein mreC.
 
 
 0.947
FIC_02471
Cell division protein ftsI (Peptidoglycan synthetase).
  
  
 
0.927
FIC_00101
Hypothetical protein.
       0.837
FIC_02467
Cell division protein ftsW; Belongs to the SEDS family.
 
 0.835
FIC_02463
Cell division protein ftsQ.
 
 
 0.806
FIC_02553
Monofunctional biosynthetic peptidoglycan transglycosylase.
 
 
 
 0.792
FIC_01365
Cyanophycin synthase; Belongs to the MurCDEF family.
  
 
 0.738
FIC_02194
Cyanophycin synthase; Belongs to the MurCDEF family.
  
 
 0.738
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.