STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00152Hypothetical protein. (152 aa)    
Predicted Functional Partners:
FIC_00153
Hypothetical protein.
 
     0.818
FIC_00154
Penicillin-binding protein 4*.
  
    0.694
FIC_01330
Hypothetical protein.
  
 
 0.545
FIC_01704
Hypothetical protein.
  
 
 0.545
FIC_00146
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
   
  
 0.498
FIC_00155
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.498
FIC_00156
acyl-CoA thioester hydrolase.
       0.483
FIC_00157
Hypothetical protein.
       0.483
FIC_01278
WD40-like beta Propeller.
  
 
 0.470
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.