STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00189Hypothetical protein. (376 aa)    
Predicted Functional Partners:
FIC_00191
Polysaccharide export outer membrane protein.
 
     0.869
FIC_00188
Beta-1,3-glucosyltransferase.
 
    0.855
FIC_00190
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
 
    0.843
FIC_00192
Tyrosine-protein kinase wzc.
 
  
 0.841
FIC_00187
Hypothetical protein.
       0.773
FIC_00009
TPR domain protein.
  
     0.765
FIC_02132
Hypothetical protein.
  
     0.761
FIC_01155
Secreted protein containing hyalin domain.
  
     0.747
FIC_00490
Hypothetical protein.
  
     0.720
FIC_00491
GldN.
  
     0.709
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.