STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00198Outer membrane protein H precursor. (164 aa)    
Predicted Functional Partners:
FIC_00196
Outer membrane protein assembly factor YaeT precursor.
 
  
 0.937
FIC_00197
Outer membrane protein H precursor.
 
     0.829
FIC_00194
Hypothetical protein.
   
 
 0.768
FIC_00195
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.736
FIC_01279
Hypothetical protein.
 
  
 0.665
FIC_00130
Peptidyl-prolyl cis-trans isomerase.
  
  
 0.593
FIC_01301
Hypothetical protein.
  
     0.587
FIC_00199
Predicted thioesterase.
       0.586
FIC_01346
Zn-ribbon protein, possibly nucleic acid-binding.
  
    0.582
FIC_02511
Hypothetical protein.
  
     0.577
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.