STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00199Predicted thioesterase. (164 aa)    
Predicted Functional Partners:
FIC_00999
Putative TonB-dependent receptor.
  
     0.681
FIC_00420
TPR repeat-containing protein.
  
     0.673
FIC_00200
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
       0.665
FIC_00201
Hypothetical protein.
       0.651
FIC_02472
Hypothetical protein.
  
     0.622
FIC_00198
Outer membrane protein H precursor.
       0.586
FIC_02535
Hypothetical protein.
  
     0.543
FIC_01973
Hypothetical protein.
  
   
 0.535
FIC_00041
Ferric siderophore transport system, periplasmic binding protein TonB.
 
    0.526
FIC_00998
TPR-domain containing protein.
 
   
 0.518
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.