STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00247Hypothetical protein. (532 aa)    
Predicted Functional Partners:
FIC_00248
Putative outer membrane protein, probably involved in nutrient binding.
   
 0.963
FIC_00751
Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J; Belongs to the ParB family.
  
 
 0.750
FIC_00997
Hypothetical protein.
  
 
   0.614
FIC_00245
O-succinylbenzoic acid-CoA ligase.
  
    0.568
argS
Arginyl-tRNA synthetase.
       0.565
FIC_00244
Hypothetical protein YaeJ; Similar to translation release factor.
       0.527
FIC_02316
Putative outer membrane protein, probably involved in nutrient binding.
 
     0.504
FIC_00541
SusC, outer membrane protein involved in starch binding.
  
 
   0.490
FIC_02254
Hypothetical protein.
  
   
 0.443
FIC_01234
Putative outer membrane protein, probably involved in nutrient binding.
  
 
 
 0.434
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.