STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00252Hypothetical protein; Belongs to the UPF0312 family. (193 aa)    
Predicted Functional Partners:
FIC_01480
Hypothetical protein.
 
     0.778
FIC_01479
Hypothetical protein.
  
     0.773
FIC_01106
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.674
FIC_01234
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.665
FIC_01105
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.655
FIC_01233
Putative outer membrane protein, probably involved in nutrient binding.
  
     0.651
FIC_01588
Hypothetical protein.
  
     0.607
FIC_00792
Hypothetical protein.
  
     0.603
FIC_00793
Hypothetical protein.
  
     0.575
FIC_01155
Secreted protein containing hyalin domain.
  
     0.546
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.