STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00333Glycosyltransferase. (362 aa)    
Predicted Functional Partners:
FIC_00367
Capsular polysaccharide biosynthsis protein.
  
     0.753
FIC_00375
Putative lipopolysaccharide biosynthesis protein.
  
     0.736
FIC_00341
Glycosyl transferase, group 1.
 
     0.718
FIC_00334
Glycosyltransferase, GT2 family.
  
   0.707
FIC_00377
Putative Capsular polysaccharide biosynthesis glycosyl transferase.
  
     0.626
FIC_00340
Hypothetical protein.
 
    0.556
FIC_00335
Lipopolysaccharide biosynthesis protein wzxC.
  
    0.550
glgB
1,4-alpha-glucan (glycogen) branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.524
FIC_00677
Alpha amylase, catalytic region; Belongs to the glycosyl hydrolase 13 family.
   
  0.524
FIC_00336
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.479
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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