STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00336DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (360 aa)    
Predicted Functional Partners:
FIC_00335
Lipopolysaccharide biosynthesis protein wzxC.
 
  
 0.914
FIC_00337
Putative hexapeptide transferase family protein.
 
  
 0.846
FIC_01947
Capsular polysaccharide biosynthesis protein.
 
  
 0.699
FIC_00338
Hypothetical protein.
 
    0.681
FIC_02329
Putative glycosyl transferase.
 
    0.634
FIC_00339
Glycosyltransferase, GT2 family.
  
    0.616
FIC_00341
Glycosyl transferase, group 1.
  
    0.605
FIC_01929
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.585
FIC_00340
Hypothetical protein.
       0.577
FIC_00334
Glycosyltransferase, GT2 family.
  
    0.540
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.