STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00351Lipid carrier : UDP-N-acetylgalactosaminyltransferase. (202 aa)    
Predicted Functional Partners:
FIC_00352
Acetyltransferase.
  
 0.989
FIC_01933
UDP-glucose 4-epimerase.
 
  
 0.915
FIC_01947
Capsular polysaccharide biosynthesis protein.
  
 0.915
FIC_00355
Tyrosine-protein kinase wzc.
 
  
 0.911
FIC_00377
Putative Capsular polysaccharide biosynthesis glycosyl transferase.
 
    0.909
FIC_00192
Tyrosine-protein kinase wzc.
 
  
 0.877
FIC_01948
4-keto.6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.872
FIC_00328
Tyrosine-protein kinase wzc.
 
  
 0.865
FIC_01945
Tyrosine-protein kinase wzc.
 
  
 0.865
FIC_00345
Putative Capsular polysaccharide biosynthesis glycosyl transferase.
 
    0.823
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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