STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00356O-antigen export system, permease protein. (282 aa)    
Predicted Functional Partners:
FIC_00359
Polysaccharide ABC transporter, ATP-binding protein.
 
 0.991
FIC_02325
Polysaccharide ABC transporter, ATP-binding protein.
 
 0.991
FIC_02324
O-antigen export system, permease protein.
  
  
 
0.902
FIC_02148
Hypothetical protein.
  
  
 0.771
FIC_00354
Polysaccharide export outer membrane protein.
  
  
 0.716
FIC_01921
UDP-galactopyranose mutase.
  
  
 0.582
FIC_00191
Polysaccharide export outer membrane protein.
  
  
 0.571
FIC_00355
Tyrosine-protein kinase wzc.
     
 0.545
FIC_00327
Polysaccharide export outer membrane protein.
  
  
 0.506
FIC_01946
Polysaccharide export outer membrane protein.
  
  
 0.506
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.