STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00367Capsular polysaccharide biosynthsis protein. (388 aa)    
Predicted Functional Partners:
FIC_00370
Glycosyltransferase.
 
     0.893
FIC_00369
Glycosyl transferase, group 1.
 
     0.878
FIC_00366
Hypothetical protein.
   0.817
FIC_00368
Beta-1,3-glucosyltransferase.
 
   0.795
FIC_00374
Probable beta-glycosyltransferase.
 
   0.771
FIC_00364
Putative glycosyltransferase.
 
   0.770
FIC_00362
Hypothetical protein.
  
    0.754
FIC_00333
Glycosyltransferase.
  
     0.753
FIC_00363
Hypothetical protein.
       0.746
FIC_00375
Putative lipopolysaccharide biosynthesis protein.
 
    
0.706
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.