STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00375Putative lipopolysaccharide biosynthesis protein. (362 aa)    
Predicted Functional Partners:
FIC_00370
Glycosyltransferase.
 
     0.941
FIC_00369
Glycosyl transferase, group 1.
 
     0.938
FIC_00374
Probable beta-glycosyltransferase.
 
   0.898
FIC_00373
Hypothetical protein.
  
    0.778
FIC_00371
Membrane bound O-acyl transferase, MBOAT family protein; Belongs to the membrane-bound acyltransferase family.
  
    0.776
FIC_00372
Hypothetical protein.
       0.773
FIC_00333
Glycosyltransferase.
  
     0.736
FIC_00367
Capsular polysaccharide biosynthsis protein.
 
    
0.706
FIC_00341
Glycosyl transferase, group 1.
  
     0.670
FIC_00366
Hypothetical protein.
  
   0.622
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.