STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00387Probable signal peptide protein. (281 aa)    
Predicted Functional Partners:
FIC_00386
Uncharacterized secreted protein of SCO1/SenC/PrrC family.
 
   
 0.944
FIC_00388
Probable nitrite reductase.
 
     0.937
FIC_00559
Hypothetical protein.
 
     0.668
FIC_00489
Hypothetical protein.
     
 0.512
FIC_02552
GldH.
  
   
 0.503
FIC_00491
GldN.
     
 0.502
FIC_00490
Hypothetical protein.
     
 0.499
FIC_00389
Hypothetical protein.
       0.438
FIC_00396
Hypothetical protein.
      
 0.424
FIC_00461
GldD.
      
 0.422
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.