STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00433Methylcrotonyl-CoA carboxylase carboxyl transferase subunit. (542 aa)    
Predicted Functional Partners:
FIC_02152
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.998
FIC_00098
Hydroxymethylglutaryl-CoA lyase.
 
 0.892
FIC_00861
Acyl-CoA dehydrogenase, short-chain specific.
 
 0.821
FIC_01987
Methylglutaconyl-CoA hydratase.
 
 0.782
FIC_02431
Biotin-protein ligase.
  
 
 0.779
FIC_00946
3-hydroxyacyl-CoA dehydrogenase/Enoyl-CoA hydratase (isoleucine degradation).
  
 
 0.742
FIC_01341
Glutaryl-CoA dehydrogenase.
  
 0.731
FIC_00434
Hypothetical protein.
       0.723
FIC_00435
Hypothetical protein.
       0.684
FIC_01046
Transketolase.
 
  
 0.639
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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