STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00458PpiC-type peptidyl-prolyl cis-trans isomerase. (467 aa)    
Predicted Functional Partners:
FIC_00196
Outer membrane protein assembly factor YaeT precursor.
  
 
 0.749
FIC_01349
Probable peptidyl-prolyl cis-trans isomerase.
   
 0.734
FIC_00459
PpiC-type peptidyl-prolyl cis-trans isomerase.
       0.693
FIC_02237
Hypothetical protein.
 
  
 0.689
FIC_01301
Hypothetical protein.
  
     0.677
FIC_00130
Peptidyl-prolyl cis-trans isomerase.
  
     0.671
FIC_00754
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.614
yidC
OxaI/YidC membrane insertion protein; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
 
  
 0.611
FIC_00153
Hypothetical protein.
  
    0.602
FIC_00700
Hypothetical protein.
 
  
 0.593
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.