STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00537Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (149 aa)    
Predicted Functional Partners:
FIC_00538
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
      0.936
dnaA
Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
      0.910
FIC_00090
Metallo-beta-lactamase superfamily protein.
  
 
 0.702
FIC_01582
Metallo-beta-lactamase superfamily protein.
  
 
 0.702
FIC_01430
3-deoxy-manno-octulosonate cytidylyltransferase; Belongs to the KdsB family.
      0.663
FIC_00192
Tyrosine-protein kinase wzc.
  
 
 0.522
FIC_00328
Tyrosine-protein kinase wzc.
  
 
 0.522
FIC_00355
Tyrosine-protein kinase wzc.
  
 
 0.522
FIC_01945
Tyrosine-protein kinase wzc.
  
 
 0.522
FIC_00539
Hypothetical protein.
       0.518
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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