STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00586Putative alpha-dextrin endo-1, 6-alpha-glucosidase. (397 aa)    
Predicted Functional Partners:
FIC_01386
ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp.
 
     0.773
FIC_01387
Putative esterase.
 
     0.759
FIC_01391
Hypothetical protein.
  
     0.721
FIC_01390
Hypothetical protein.
  
     0.720
FIC_01388
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein.
 
     0.706
FIC_01780
1,4-alpha-glucan branching enzyme.
  
     0.539
glgB
1,4-alpha-glucan (glycogen) branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
       0.529
FIC_00589
ErfK/YbiS/YcfS/YnhG family protein.
 
     0.515
FIC_01727
Alpha-amylase, putative.
  
     0.488
FIC_01114
Hypothetical protein.
 
    
0.480
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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