Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FIC_00591 | FIC_00592 | FIC_00591 | FIC_00592 | Hypothetical protein. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.581 |
FIC_00591 | FIC_00593 | FIC_00591 | FIC_00593 | Hypothetical protein. | Hypothetical protein. | 0.439 |
FIC_00592 | FIC_00591 | FIC_00592 | FIC_00591 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Hypothetical protein. | 0.581 |
FIC_00592 | FIC_00593 | FIC_00592 | FIC_00593 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Hypothetical protein. | 0.580 |
FIC_00592 | FIC_00668 | FIC_00592 | FIC_00668 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Malate synthase; Belongs to the malate synthase family. | 0.845 |
FIC_00592 | FIC_00973 | FIC_00592 | FIC_00973 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Isocitrate dehydrogenase (NADP); Belongs to the monomeric-type IDH family. | 0.725 |
FIC_00592 | FIC_01991 | FIC_00592 | FIC_01991 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Citrate synthase (si); Belongs to the citrate synthase family. | 0.845 |
FIC_00592 | FIC_02092 | FIC_00592 | FIC_02092 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.923 |
FIC_00592 | FIC_02175 | FIC_00592 | FIC_02175 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Aspartate aminotransferase. | 0.600 |
FIC_00592 | FIC_02294 | FIC_00592 | FIC_02294 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.922 |
FIC_00592 | eno | FIC_00592 | FIC_01992 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.925 |
FIC_00592 | pckA | FIC_00592 | FIC_02307 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.922 |
FIC_00593 | FIC_00591 | FIC_00593 | FIC_00591 | Hypothetical protein. | Hypothetical protein. | 0.439 |
FIC_00593 | FIC_00592 | FIC_00593 | FIC_00592 | Hypothetical protein. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.580 |
FIC_00668 | FIC_00592 | FIC_00668 | FIC_00592 | Malate synthase; Belongs to the malate synthase family. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.845 |
FIC_00668 | FIC_01991 | FIC_00668 | FIC_01991 | Malate synthase; Belongs to the malate synthase family. | Citrate synthase (si); Belongs to the citrate synthase family. | 0.965 |
FIC_00668 | FIC_02092 | FIC_00668 | FIC_02092 | Malate synthase; Belongs to the malate synthase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.936 |
FIC_00668 | pckA | FIC_00668 | FIC_02307 | Malate synthase; Belongs to the malate synthase family. | Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.850 |
FIC_00973 | FIC_00592 | FIC_00973 | FIC_00592 | Isocitrate dehydrogenase (NADP); Belongs to the monomeric-type IDH family. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. | 0.725 |
FIC_00973 | FIC_01991 | FIC_00973 | FIC_01991 | Isocitrate dehydrogenase (NADP); Belongs to the monomeric-type IDH family. | Citrate synthase (si); Belongs to the citrate synthase family. | 0.524 |
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