STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00599TonB-dependent receptor, putative. (841 aa)    
Predicted Functional Partners:
FIC_00715
Hypothetical protein.
  
     0.714
FIC_01308
Putative outer membrane protein.
  
     0.711
FIC_00417
TonB family protein.
  
   0.678
FIC_00752
Hypothetical protein.
  
     0.670
FIC_02237
Hypothetical protein.
  
     0.665
FIC_01301
Hypothetical protein.
  
     0.649
FIC_00499
Hypothetical protein.
  
     0.632
FIC_00153
Hypothetical protein.
  
     0.629
FIC_01279
Hypothetical protein.
  
     0.618
FIC_00130
Peptidyl-prolyl cis-trans isomerase.
  
     0.617
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.