STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00653Dithiol-disulfide isomerase. (234 aa)    
Predicted Functional Partners:
FIC_00652
Transcription elongation factor GreB.
       0.752
FIC_00519
Hypothetical protein; Belongs to the ArsC family.
   
 
 0.636
FIC_01531
Arsenate reductase; Belongs to the ArsC family.
   
 
 0.636
FIC_00654
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
     
 0.573
FIC_00021
Hypothetical protein.
  
  
 0.524
FIC_00651
YceI like family protein; Belongs to the UPF0312 family.
  
    0.513
FIC_01271
Acyl carrier protein phosphodiesterase.
  
    0.440
FIC_00655
Phosphinothricin N-acetyltransferase.
       0.408
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.