STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00736Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. (323 aa)    
Predicted Functional Partners:
FIC_00195
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.976
FIC_01859
Diphosphomevalonate decarboxylase.
  
 0.939
FIC_00523
Putative Nudix hydrolase YfcD.
 
 
 0.936
FIC_01182
Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.927
FIC_01506
Phytoene synthase.
  
 0.906
cmk
Cytidylate kinase.
 
    0.672
FIC_00739
Putative deoxyribonuclease YcfH.
   
   0.647
FIC_00968
4-hydroxybenzoate polyprenyltransferase.
 
 
 0.633
FIC_00737
Hypothetical protein.
       0.624
FIC_00738
Protease synthase and sporulation negative regulatory protein pai 1.
  
    0.578
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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