STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00868Metalloprotease, putative. (881 aa)    
Predicted Functional Partners:
FIC_01381
Peptidase M4, thermolysin.
  
 
   0.583
FIC_01304
TonB-dependent receptor, plug.
  
 
   0.577
FIC_01952
Hypothetical protein.
  
     0.574
FIC_00867
SSU ribosomal protein S1p; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
  
    0.572
FIC_00325
Hypothetical protein.
 
     0.556
FIC_01288
Peptidase families S8 and S53 domain protein.
  
   0.547
FIC_00849
Bacterial leucyl aminopeptidase.
  
     0.512
FIC_01951
Protein containing immunoglobulin-like domain.
  
     0.510
FIC_00869
Hypothetical protein.
      
0.499
FIC_01432
Hypothetical protein.
  
     0.494
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.