STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_00887Hydrolase, haloacid dehalogenase-like family protein. (206 aa)    
Predicted Functional Partners:
FIC_00788
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
FIC_01042
Aldehyde dehydrogenase B; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
FIC_01836
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.900
FIC_00888
Methionine transporter MetT.
  
    0.776
FIC_00889
Hypothetical protein.
       0.773
FIC_01326
GCN5-related N-acetyltransferase.
 
    0.614
FIC_00890
DNA polymerase III delta subunit.
  
    0.592
FIC_01655
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.538
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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