Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
FIC_00861 | FIC_00925 | Acyl-CoA dehydrogenase, short-chain specific. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.643 |
FIC_00861 | FIC_00944 | Acyl-CoA dehydrogenase, short-chain specific. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.571 |
FIC_00861 | FIC_00946 | Acyl-CoA dehydrogenase, short-chain specific. | 3-hydroxyacyl-CoA dehydrogenase/Enoyl-CoA hydratase (isoleucine degradation). | 0.963 |
FIC_00861 | FIC_00965 | Acyl-CoA dehydrogenase, short-chain specific. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.571 |
FIC_00861 | FIC_01598 | Acyl-CoA dehydrogenase, short-chain specific. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.571 |
FIC_00873 | FIC_00876 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | 0.999 |
FIC_00873 | FIC_00925 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.918 |
FIC_00873 | FIC_00944 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.855 |
FIC_00873 | FIC_00946 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | 3-hydroxyacyl-CoA dehydrogenase/Enoyl-CoA hydratase (isoleucine degradation). | 0.954 |
FIC_00873 | FIC_00965 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.924 |
FIC_00873 | FIC_01598 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.851 |
FIC_00876 | FIC_00873 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | 0.999 |
FIC_00876 | FIC_00925 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.925 |
FIC_00876 | FIC_00944 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.864 |
FIC_00876 | FIC_00946 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | 3-hydroxyacyl-CoA dehydrogenase/Enoyl-CoA hydratase (isoleucine degradation). | 0.958 |
FIC_00876 | FIC_00965 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.930 |
FIC_00876 | FIC_01598 | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.861 |
FIC_00925 | FIC_00861 | 3-hydroxybutyryl-CoA dehydrogenase. | Acyl-CoA dehydrogenase, short-chain specific. | 0.643 |
FIC_00925 | FIC_00873 | 3-hydroxybutyryl-CoA dehydrogenase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A. | 0.918 |
FIC_00925 | FIC_00876 | 3-hydroxybutyryl-CoA dehydrogenase. | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B. | 0.925 |
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