STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01002Organic hydroperoxide resistance transcriptional regulator. (153 aa)    
Predicted Functional Partners:
FIC_01001
Organic hydroperoxide resistance protein.
  
 0.983
FIC_01003
Oxygen-insensitive NAD(P)H nitroreductase.
  
    0.800
FIC_01779
PAS/PAC domain protein.
  
  
 0.561
FIC_00774
PAS/PAC domain protein.
  
  
 0.477
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
       0.477
FIC_01712
Signal transduction histidine kinase.
  
  
 0.470
FIC_01708
FOG: PAS/PAC domain protein.
  
  
 0.418
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.